@MappedSuperclass
public class AbstractEmbeddable {
  private String auditedSuperclassData;
  private String nonAuditedSuperclassData;
  private String nonAuditedSuperclassDataTwo;
  /* other stuff eliminated for breavity */
}

@Embeddable
@AuditOverride(name = "nonAuditedSuperclassDataTwo", forClass = AbstractEmbeddable.class, isAudited = false)
public class BaseEmbeddable {
  private String auditedEmbeddableData;
  private String nonAuditedEmbeddableData;
  /* other stuff eliminated for breavity */
}

@Entity
@Audited
public class BaseEntity {
  /* other stuff eliminated for breavity */
  @Embedded
  @AuditOverrides({
    @AuditOverride(name = "nonAuditedSuperclassData", forClass = AbstractEmbeddable.class, isAudited = false),
    @AuditOverride(name = "nonAuditedEmbeddableData", isAudited = false)
  })
  private BaseEmbeddable embeddable;
}