[infinispan-issues] [JBoss JIRA] (ISPN-3375) Map/Reduce jobs with small value sizes fail because of timeouts putting intermediate keys into the cache

Map/Reduce jobs with small value sizes fail because of timeouts putting intermediate keys into the cache -------------------------------------------------------------------------------------------------------- Key: ISPN-3375 URL: https://issues.jboss.org/browse/ISPN-3375 Project: Infinispan Issue Type: Bug Components: Distributed Execution and Map/Reduce Affects Versions: 5.3.0.Final Reporter: Alan Field Assignee: Dan Berindei Priority: Critical Labels: jdg62GAblocker Fix For: 6.0.0.CR1, 6.0.0.Final Attachments: stdout.zip The following exception occurs on the primary node running a Map/Reduce job with 1KB values: {noformat} 12:57:32,755 ERROR [org.radargun.stages.MapReduceStage] (pool-1-thread-1) executeMapReduceTask() returned an exception org.infinispan.CacheException: java.util.concurrent.ExecutionException: org.infinispan.remoting.RemoteException: ISPN000217: Received exception from edg-perf03-15313, see cause for remote stack trace at org.infinispan.distexec.mapreduce.MapReduceTask.execute(MapReduceTask.java:369) at org.radargun.cachewrappers.InfinispanMapReduceWrapper.executeMapReduceTask(InfinispanMapReduceWrapper.java:113) at org.radargun.stages.MapReduceStage.executeMapReduceTask(MapReduceStage.java:207) at org.radargun.stages.MapReduceStage.executeOnSlave(MapReduceStage.java:149) at org.radargun.Slave$2.run(Slave.java:103) at java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:471) at java.util.concurrent.FutureTask$Sync.innerRun(FutureTask.java:334) at java.util.concurrent.FutureTask.run(FutureTask.java:166) at java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1145) at java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:615) at java.lang.Thread.run(Thread.java:724) Caused by: java.util.concurrent.ExecutionException: org.infinispan.remoting.RemoteException: ISPN000217: Received exception from edg-perf03-15313, see cause for remote stack trace at java.util.concurrent.FutureTask$Sync.innerGet(FutureTask.java:252) at java.util.concurrent.FutureTask.get(FutureTask.java:111) at org.infinispan.distexec.mapreduce.MapReduceTask$TaskPart.get(MapReduceTask.java:867) at org.infinispan.distexec.mapreduce.MapReduceTask.executeMapPhase(MapReduceTask.java:461) at org.infinispan.distexec.mapreduce.MapReduceTask.execute(MapReduceTask.java:363) ... 10 more Caused by: org.infinispan.remoting.RemoteException: ISPN000217: Received exception from edg-perf03-15313, see cause for remote stack trace at org.infinispan.remoting.transport.AbstractTransport.checkResponse(AbstractTransport.java:70) at org.infinispan.remoting.transport.jgroups.CommandAwareRpcDispatcher.processSingleCall(CommandAwareRpcDispatcher.java:384) at org.infinispan.remoting.transport.jgroups.CommandAwareRpcDispatcher.invokeRemoteCommand(CommandAwareRpcDispatcher.java:189) at org.infinispan.remoting.transport.jgroups.JGroupsTransport.invokeRemotely(JGroupsTransport.java:531) at org.infinispan.remoting.rpc.RpcManagerImpl.invokeRemotely(RpcManagerImpl.java:303) at org.infinispan.remoting.rpc.RpcManagerImpl$2.call(RpcManagerImpl.java:340) ... 5 more Caused by: org.infinispan.CacheException: org.infinispan.CacheException: Could not move intermediate keys/values for M/R task edc7a51c-d25a-4650-b39a-8d8a87d7cd61 at org.infinispan.distexec.mapreduce.MapReduceManagerImpl.mapAndCombineForDistributedReduction(MapReduceManagerImpl.java:114) at org.infinispan.commands.read.MapCombineCommand.perform(MapCombineCommand.java:93) at org.infinispan.remoting.InboundInvocationHandlerImpl.handleInternal(InboundInvocationHandlerImpl.java:122) at org.infinispan.remoting.InboundInvocationHandlerImpl.access$000(InboundInvocationHandlerImpl.java:68) at org.infinispan.remoting.InboundInvocationHandlerImpl$2.run(InboundInvocationHandlerImpl.java:194) ... 3 more Caused by: org.infinispan.CacheException: Could not move intermediate keys/values for M/R task edc7a51c-d25a-4650-b39a-8d8a87d7cd61 at org.infinispan.distexec.mapreduce.MapReduceManagerImpl.combine(MapReduceManagerImpl.java:331) at org.infinispan.distexec.mapreduce.MapReduceManagerImpl.mapAndCombineForDistributedReduction(MapReduceManagerImpl.java:112) ... 7 more Caused by: org.infinispan.util.concurrent.TimeoutException: Node edg-perf02-56077 timed out at org.infinispan.remoting.transport.jgroups.CommandAwareRpcDispatcher.invokeRemoteCommand(CommandAwareRpcDispatcher.java:196) at org.infinispan.remoting.transport.jgroups.JGroupsTransport.invokeRemotely(JGroupsTransport.java:531) at org.infinispan.remoting.rpc.RpcManagerImpl.invokeRemotely(RpcManagerImpl.java:303) at org.infinispan.interceptors.distribution.BaseDistributionInterceptor.handleNonTxWriteCommand(BaseDistributionInterceptor.java:151) at org.infinispan.interceptors.distribution.NonTxDistributionInterceptor.visitPutKeyValueCommand(NonTxDistributionInterceptor.java:91) at org.infinispan.commands.write.PutKeyValueCommand.acceptVisitor(PutKeyValueCommand.java:83) at org.infinispan.interceptors.base.CommandInterceptor.invokeNextInterceptor(CommandInterceptor.java:120) at org.infinispan.interceptors.EntryWrappingInterceptor.invokeNextAndApplyChanges(EntryWrappingInterceptor.java:290) at org.infinispan.interceptors.EntryWrappingInterceptor.visitPutKeyValueCommand(EntryWrappingInterceptor.java:157) at org.infinispan.commands.write.PutKeyValueCommand.acceptVisitor(PutKeyValueCommand.java:83) at org.infinispan.interceptors.base.CommandInterceptor.invokeNextInterceptor(CommandInterceptor.java:120) at org.infinispan.interceptors.locking.AbstractLockingInterceptor.visitPutKeyValueCommand(AbstractLockingInterceptor.java:70) at org.infinispan.commands.write.PutKeyValueCommand.acceptVisitor(PutKeyValueCommand.java:83) at org.infinispan.interceptors.base.CommandInterceptor.invokeNextInterceptor(CommandInterceptor.java:120) at org.infinispan.interceptors.base.CommandInterceptor.handleDefault(CommandInterceptor.java:134) at org.infinispan.commands.AbstractVisitor.visitPutKeyValueCommand(AbstractVisitor.java:54) at org.infinispan.commands.write.PutKeyValueCommand.acceptVisitor(PutKeyValueCommand.java:83) at org.infinispan.interceptors.base.CommandInterceptor.invokeNextInterceptor(CommandInterceptor.java:120) at org.infinispan.interceptors.base.CommandInterceptor.handleDefault(CommandInterceptor.java:134) at org.infinispan.commands.AbstractVisitor.visitPutKeyValueCommand(AbstractVisitor.java:54) at org.infinispan.commands.write.PutKeyValueCommand.acceptVisitor(PutKeyValueCommand.java:83) at org.infinispan.interceptors.base.CommandInterceptor.invokeNextInterceptor(CommandInterceptor.java:120) at org.infinispan.statetransfer.StateTransferInterceptor.handleTopologyAffectedCommand(StateTransferInterceptor.java:216) at org.infinispan.statetransfer.StateTransferInterceptor.handleWriteCommand(StateTransferInterceptor.java:194) at org.infinispan.statetransfer.StateTransferInterceptor.visitPutKeyValueCommand(StateTransferInterceptor.java:136) at org.infinispan.commands.write.PutKeyValueCommand.acceptVisitor(PutKeyValueCommand.java:83) at org.infinispan.interceptors.base.CommandInterceptor.invokeNextInterceptor(CommandInterceptor.java:120) at org.infinispan.interceptors.CacheMgmtInterceptor.visitPutKeyValueCommand(CacheMgmtInterceptor.java:160) at org.infinispan.commands.write.PutKeyValueCommand.acceptVisitor(PutKeyValueCommand.java:83) at org.infinispan.interceptors.base.CommandInterceptor.invokeNextInterceptor(CommandInterceptor.java:120) at org.infinispan.interceptors.InvocationContextInterceptor.handleAll(InvocationContextInterceptor.java:128) at org.infinispan.interceptors.InvocationContextInterceptor.handleDefault(InvocationContextInterceptor.java:92) at org.infinispan.commands.AbstractVisitor.visitPutKeyValueCommand(AbstractVisitor.java:54) at org.infinispan.commands.write.PutKeyValueCommand.acceptVisitor(PutKeyValueCommand.java:83) at org.infinispan.interceptors.InterceptorChain.invoke(InterceptorChain.java:343) at org.infinispan.CacheImpl.executeCommandAndCommitIfNeeded(CacheImpl.java:1337) at org.infinispan.CacheImpl.putInternal(CacheImpl.java:898) at org.infinispan.CacheImpl.put(CacheImpl.java:890) at org.infinispan.CacheImpl.put(CacheImpl.java:1390) at org.infinispan.CacheImpl.put(CacheImpl.java:229) at org.infinispan.distexec.mapreduce.MapReduceManagerImpl.combine(MapReduceManagerImpl.java:326) ... 8 more Caused by: org.jgroups.TimeoutException: timeout sending message to edg-perf02-56077 at org.jgroups.blocks.MessageDispatcher.sendMessage(MessageDispatcher.java:419) at org.infinispan.remoting.transport.jgroups.CommandAwareRpcDispatcher.processSingleCall(CommandAwareRpcDispatcher.java:375) at org.infinispan.remoting.transport.jgroups.CommandAwareRpcDispatcher.invokeRemoteCommand(CommandAwareRpcDispatcher.java:189) ... 48 more {noformat} And this exception is occurring on the other node in the cluster: {noformat} 12:57:32,484 ERROR [org.infinispan.interceptors.InvocationContextInterceptor] (remote-thread-0) ISPN000136: Execution error org.infinispan.util.concurrent.TimeoutException: Node edg-perf02-56077 timed out at org.infinispan.remoting.transport.jgroups.CommandAwareRpcDispatcher.invokeRemoteCommand(CommandAwareRpcDispatcher.java:196) at org.infinispan.remoting.transport.jgroups.JGroupsTransport.invokeRemotely(JGroupsTransport.java:531) at org.infinispan.remoting.rpc.RpcManagerImpl.invokeRemotely(RpcManagerImpl.java:303) at org.infinispan.interceptors.distribution.BaseDistributionInterceptor.handleNonTxWriteCommand(BaseDistributionInterceptor.java:151) at org.infinispan.interceptors.distribution.NonTxDistributionInterceptor.visitPutKeyValueCommand(NonTxDistributionInterceptor.java:91) at org.infinispan.commands.write.PutKeyValueCommand.acceptVisitor(PutKeyValueCommand.java:83) at org.infinispan.interceptors.base.CommandInterceptor.invokeNextInterceptor(CommandInterceptor.java:120) at org.infinispan.interceptors.EntryWrappingInterceptor.invokeNextAndApplyChanges(EntryWrappingInterceptor.java:290) at org.infinispan.interceptors.EntryWrappingInterceptor.visitPutKeyValueCommand(EntryWrappingInterceptor.java:157) at org.infinispan.commands.write.PutKeyValueCommand.acceptVisitor(PutKeyValueCommand.java:83) at org.infinispan.interceptors.base.CommandInterceptor.invokeNextInterceptor(CommandInterceptor.java:120) at org.infinispan.interceptors.locking.AbstractLockingInterceptor.visitPutKeyValueCommand(AbstractLockingInterceptor.java:70) at org.infinispan.commands.write.PutKeyValueCommand.acceptVisitor(PutKeyValueCommand.java:83) at org.infinispan.interceptors.base.CommandInterceptor.invokeNextInterceptor(CommandInterceptor.java:120) at org.infinispan.interceptors.base.CommandInterceptor.handleDefault(CommandInterceptor.java:134) at org.infinispan.commands.AbstractVisitor.visitPutKeyValueCommand(AbstractVisitor.java:54) at org.infinispan.commands.write.PutKeyValueCommand.acceptVisitor(PutKeyValueCommand.java:83) at org.infinispan.interceptors.base.CommandInterceptor.invokeNextInterceptor(CommandInterceptor.java:120) at org.infinispan.interceptors.base.CommandInterceptor.handleDefault(CommandInterceptor.java:134) at org.infinispan.commands.AbstractVisitor.visitPutKeyValueCommand(AbstractVisitor.java:54) at org.infinispan.commands.write.PutKeyValueCommand.acceptVisitor(PutKeyValueCommand.java:83) at org.infinispan.interceptors.base.CommandInterceptor.invokeNextInterceptor(CommandInterceptor.java:120) at org.infinispan.statetransfer.StateTransferInterceptor.handleTopologyAffectedCommand(StateTransferInterceptor.java:216) at org.infinispan.statetransfer.StateTransferInterceptor.handleWriteCommand(StateTransferInterceptor.java:194) at org.infinispan.statetransfer.StateTransferInterceptor.visitPutKeyValueCommand(StateTransferInterceptor.java:136) at org.infinispan.commands.write.PutKeyValueCommand.acceptVisitor(PutKeyValueCommand.java:83) at org.infinispan.interceptors.base.CommandInterceptor.invokeNextInterceptor(CommandInterceptor.java:120) at org.infinispan.interceptors.CacheMgmtInterceptor.visitPutKeyValueCommand(CacheMgmtInterceptor.java:160) at org.infinispan.commands.write.PutKeyValueCommand.acceptVisitor(PutKeyValueCommand.java:83) at org.infinispan.interceptors.base.CommandInterceptor.invokeNextInterceptor(CommandInterceptor.java:120) at org.infinispan.interceptors.InvocationContextInterceptor.handleAll(InvocationContextInterceptor.java:128) at org.infinispan.interceptors.InvocationContextInterceptor.handleDefault(InvocationContextInterceptor.java:92) at org.infinispan.commands.AbstractVisitor.visitPutKeyValueCommand(AbstractVisitor.java:54) at org.infinispan.commands.write.PutKeyValueCommand.acceptVisitor(PutKeyValueCommand.java:83) at org.infinispan.interceptors.InterceptorChain.invoke(InterceptorChain.java:343) at org.infinispan.CacheImpl.executeCommandAndCommitIfNeeded(CacheImpl.java:1337) at org.infinispan.CacheImpl.putInternal(CacheImpl.java:898) at org.infinispan.CacheImpl.put(CacheImpl.java:890) at org.infinispan.CacheImpl.put(CacheImpl.java:1390) at org.infinispan.CacheImpl.put(CacheImpl.java:229) at org.infinispan.distexec.mapreduce.MapReduceManagerImpl.combine(MapReduceManagerImpl.java:326) at org.infinispan.distexec.mapreduce.MapReduceManagerImpl.mapAndCombineForDistributedReduction(MapReduceManagerImpl.java:112) at org.infinispan.commands.read.MapCombineCommand.perform(MapCombineCommand.java:93) at org.infinispan.remoting.InboundInvocationHandlerImpl.handleInternal(InboundInvocationHandlerImpl.java:122) at org.infinispan.remoting.InboundInvocationHandlerImpl.access$000(InboundInvocationHandlerImpl.java:68) at org.infinispan.remoting.InboundInvocationHandlerImpl$2.run(InboundInvocationHandlerImpl.java:194) at java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1145) at java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:615) at java.lang.Thread.run(Thread.java:724) Caused by: org.jgroups.TimeoutException: timeout sending message to edg-perf02-56077 at org.jgroups.blocks.MessageDispatcher.sendMessage(MessageDispatcher.java:419) at org.infinispan.remoting.transport.jgroups.CommandAwareRpcDispatcher.processSingleCall(CommandAwareRpcDispatcher.java:375) at org.infinispan.remoting.transport.jgroups.CommandAwareRpcDispatcher.invokeRemoteCommand(CommandAwareRpcDispatcher.java:189) ... 48 more 12:57:32,494 ERROR [org.infinispan.remoting.InboundInvocationHandlerImpl] (remote-thread-0) Exception executing command org.infinispan.CacheException: org.infinispan.CacheException: Could not move intermediate keys/values for M/R task edc7a51c-d25a-4650-b39a-8d8a87d7cd61 at org.infinispan.distexec.mapreduce.MapReduceManagerImpl.mapAndCombineForDistributedReduction(MapReduceManagerImpl.java:114) at org.infinispan.commands.read.MapCombineCommand.perform(MapCombineCommand.java:93) at org.infinispan.remoting.InboundInvocationHandlerImpl.handleInternal(InboundInvocationHandlerImpl.java:122) at org.infinispan.remoting.InboundInvocationHandlerImpl.access$000(InboundInvocationHandlerImpl.java:68) at org.infinispan.remoting.InboundInvocationHandlerImpl$2.run(InboundInvocationHandlerImpl.java:194) at java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1145) at java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:615) at java.lang.Thread.run(Thread.java:724) Caused by: org.infinispan.CacheException: Could not move intermediate keys/values for M/R task edc7a51c-d25a-4650-b39a-8d8a87d7cd61 at org.infinispan.distexec.mapreduce.MapReduceManagerImpl.combine(MapReduceManagerImpl.java:331) at org.infinispan.distexec.mapreduce.MapReduceManagerImpl.mapAndCombineForDistributedReduction(MapReduceManagerImpl.java:112) ... 7 more Caused by: org.infinispan.util.concurrent.TimeoutException: Node edg-perf02-56077 timed out at org.infinispan.remoting.transport.jgroups.CommandAwareRpcDispatcher.invokeRemoteCommand(CommandAwareRpcDispatcher.java:196) at org.infinispan.remoting.transport.jgroups.JGroupsTransport.invokeRemotely(JGroupsTransport.java:531) at org.infinispan.remoting.rpc.RpcManagerImpl.invokeRemotely(RpcManagerImpl.java:303) at org.infinispan.interceptors.distribution.BaseDistributionInterceptor.handleNonTxWriteCommand(BaseDistributionInterceptor.java:151) at org.infinispan.interceptors.distribution.NonTxDistributionInterceptor.visitPutKeyValueCommand(NonTxDistributionInterceptor.java:91) at org.infinispan.commands.write.PutKeyValueCommand.acceptVisitor(PutKeyValueCommand.java:83) at org.infinispan.interceptors.base.CommandInterceptor.invokeNextInterceptor(CommandInterceptor.java:120) at org.infinispan.interceptors.EntryWrappingInterceptor.invokeNextAndApplyChanges(EntryWrappingInterceptor.java:290) at org.infinispan.interceptors.EntryWrappingInterceptor.visitPutKeyValueCommand(EntryWrappingInterceptor.java:157) at org.infinispan.commands.write.PutKeyValueCommand.acceptVisitor(PutKeyValueCommand.java:83) at org.infinispan.interceptors.base.CommandInterceptor.invokeNextInterceptor(CommandInterceptor.java:120) at org.infinispan.interceptors.locking.AbstractLockingInterceptor.visitPutKeyValueCommand(AbstractLockingInterceptor.java:70) at org.infinispan.commands.write.PutKeyValueCommand.acceptVisitor(PutKeyValueCommand.java:83) at org.infinispan.interceptors.base.CommandInterceptor.invokeNextInterceptor(CommandInterceptor.java:120) at org.infinispan.interceptors.base.CommandInterceptor.handleDefault(CommandInterceptor.java:134) at org.infinispan.commands.AbstractVisitor.visitPutKeyValueCommand(AbstractVisitor.java:54) at org.infinispan.commands.write.PutKeyValueCommand.acceptVisitor(PutKeyValueCommand.java:83) at org.infinispan.interceptors.base.CommandInterceptor.invokeNextInterceptor(CommandInterceptor.java:120) at org.infinispan.interceptors.base.CommandInterceptor.handleDefault(CommandInterceptor.java:134) at org.infinispan.commands.AbstractVisitor.visitPutKeyValueCommand(AbstractVisitor.java:54) at org.infinispan.commands.write.PutKeyValueCommand.acceptVisitor(PutKeyValueCommand.java:83) at org.infinispan.interceptors.base.CommandInterceptor.invokeNextInterceptor(CommandInterceptor.java:120) at org.infinispan.statetransfer.StateTransferInterceptor.handleTopologyAffectedCommand(StateTransferInterceptor.java:216) at org.infinispan.statetransfer.StateTransferInterceptor.handleWriteCommand(StateTransferInterceptor.java:194) at org.infinispan.statetransfer.StateTransferInterceptor.visitPutKeyValueCommand(StateTransferInterceptor.java:136) at org.infinispan.commands.write.PutKeyValueCommand.acceptVisitor(PutKeyValueCommand.java:83) at org.infinispan.interceptors.base.CommandInterceptor.invokeNextInterceptor(CommandInterceptor.java:120) at org.infinispan.interceptors.CacheMgmtInterceptor.visitPutKeyValueCommand(CacheMgmtInterceptor.java:160) at org.infinispan.commands.write.PutKeyValueCommand.acceptVisitor(PutKeyValueCommand.java:83) at org.infinispan.interceptors.base.CommandInterceptor.invokeNextInterceptor(CommandInterceptor.java:120) at org.infinispan.interceptors.InvocationContextInterceptor.handleAll(InvocationContextInterceptor.java:128) at org.infinispan.interceptors.InvocationContextInterceptor.handleDefault(InvocationContextInterceptor.java:92) at org.infinispan.commands.AbstractVisitor.visitPutKeyValueCommand(AbstractVisitor.java:54) at org.infinispan.commands.write.PutKeyValueCommand.acceptVisitor(PutKeyValueCommand.java:83) at org.infinispan.interceptors.InterceptorChain.invoke(InterceptorChain.java:343) at org.infinispan.CacheImpl.executeCommandAndCommitIfNeeded(CacheImpl.java:1337) at org.infinispan.CacheImpl.putInternal(CacheImpl.java:898) at org.infinispan.CacheImpl.put(CacheImpl.java:890) at org.infinispan.CacheImpl.put(CacheImpl.java:1390) at org.infinispan.CacheImpl.put(CacheImpl.java:229) at org.infinispan.distexec.mapreduce.MapReduceManagerImpl.combine(MapReduceManagerImpl.java:326) ... 8 more Caused by: org.jgroups.TimeoutException: timeout sending message to edg-perf02-56077 at org.jgroups.blocks.MessageDispatcher.sendMessage(MessageDispatcher.java:419) at org.infinispan.remoting.transport.jgroups.CommandAwareRpcDispatcher.processSingleCall(CommandAwareRpcDispatcher.java:375) at org.infinispan.remoting.transport.jgroups.CommandAwareRpcDispatcher.invokeRemoteCommand(CommandAwareRpcDispatcher.java:189) ... 48 more {noformat} ISPN-2836 added a timeout for the entire MapReduceTask, but this timeout is happening when the intermediate keys are put into the cache by the map phase. This error does not occur when the value size is 8KB or larger.