[jboss-jira] [JBoss JIRA] Created: (JBRULES-2414) Another test case of bugs with nested prefix-and and prefix-or conditional expressions
Another test case of bugs with nested prefix-and and prefix-or conditional expressions
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Key: JBRULES-2414
URL: https://jira.jboss.org/jira/browse/JBRULES-2414
Project: Drools
Issue Type: Sub-task
Security Level: Public (Everyone can see)
Components: drools-compiler (expert)
Affects Versions: 5.0.1.FINAL
Environment: Drools 5.0.1 on windows, jdk1.6.0_13
Reporter: Nelson Axelrod
Assignee: Mark Proctor
Edson recommended submission of this ticket to JIRA -- rules-users Digest, Vol 38, Issue
58
rule "test lysine decarboxylase"
when
(or
(and
blast_hit : BlastHit( hitId=='GB|AAQ16631.1')
gene1 : Feature( featureId == blast_hit.queryId )
)
(or
(and
blast_hit : BlastHit( hitId=='GB|AAQ16631.1' )
gene1 : Feature( featureId == blast_hit.queryId )
)
(and
hmm_hit1 : HmmHit( hitId=='TIGR00905' )
gene1 : Feature( featureId == hmm_hit1.queryId )
gene2 : Feature( eval(gene2.isWithin(gene1, 500)) )
)
)
)
then
Annotation a = new Annotation("lysine decarboxylase CadA");
gene1.addAnnotation(a);
end
Exception in thread "main"
org.jcvi.annotation.rulesengine.RulesResourceException: Could not parse
resource in [FileResource
file='C:\development\workspace\RulesBasedAnnotation\tests\org\jcvi\annot
ation\rules\testNestedOr.drl'] with errors
[14,4]: [ERR 101] Line 14:4 no viable alternative at input 'blast_hit'
in rule "2645|lysine decarboxylase CadA" in pattern or[22,2]: [ERR 102]
Line 22:2 mismatched input ')' expecting 'then' in rule "2645|lysine
decarboxylase CadA"
at
org.jcvi.annotation.rulesengine.RulesEngine.addResource(RulesEngine.java
:103)
at
org.jcvi.annotation.rulesengine.RulesEngine.addResource(RulesEngine.java
:83)
at org.jcvi.annotation.Aruba.addRuleByFile(Aruba.java:68)
at org.jcvi.annotation.Aruba.main(Aruba.java:253)
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