In Jopr, we're using the same deployment method regardless of whether we run embedded
in the admin console or in the remote agent.
The deployment boils down to
http://anonsvn.jboss.org/repos/jopr/trunk/modules/plugins/jboss-as-5/src/...
deployArchive() method.
This method would cause the symptoms I mentioned above if run from the agent (i.e. from
different JVM on the same machine) and the provided archiveFile would point outside
$SERVER_HOME.
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